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Partner publications list - Papers in Journals
Abbott RJ, Harris SA, Lowe AJ (1997) Interspecific hybridization and the origin of new plant taxa in Scotland. Botanical Journal of Scotland 49: 247-256.
Abbott RJ, Lowe AJ (2004) Origins, establishment and evolution of two new polyploid species of Senecio in the
Austerlitz F, Dick CW, Dutech C, Klein EK, Oddou-Muratorio S, Smouse PE, Sork VL (2004) Using genetic markers to estimate the pollen dispersal curve. Molecular Ecology 13: 937-954.
Bâcles CFE, Burczyk J, Lowe AJ, Ennos RA (2005) Historical and contemporary mating patterns in remnant populations of the forest tree Fraxinus excelsior L. Evolution 59: 979-990.
Bâcles CFE, Lowe AJ, Ennos RA (2004) Genetic effects of chronic habitat fragmentation on tree species: the case of Sorbus aucuparia in a deforested Scottish landscape.
Bennici A, Anzidei M, Vendramin GG (2004) – Genetic stability and uniformity of Foeniculum vulgare Mill. Regenerated plants through organogenisis and somatic embryogenesis. Plant Science 166: 221-227.
Boshier, DH (1995) Incompatibility in Cordia alliodora (Boraginaceae), a neotropical tree. Canadian Journal of Botany 73: 445-456.
Boshier DH, Chase MR,
Boshier DH, Chase MR,
Brondani RPV, Gaiotto FA, Missiaggia AA, Kirst M, Gribel R, Grattapaglia D (2003) Microsatellite markers for Ceiba pentandra (Bombacaceae), an endangered tree species of the Amazon forest. Molecular Ecology Notes 3: 177-179.
Bruschi P, Vendramin GG, Busotti F, Grassoni P (2003) - Morphological and Molecular diversity among Italian populations of Quercus petraea (Fagaceae). Annals of Botany 91: 707-716.
Cardoso MA, Provan J, Powell W, Ferreira PCG, de Oliveira DE (1998) High genetic differentiation among remnant populations of the endangered Caesalpinia echinata Lam. (Leguminosae-Caesalpinioideae). Molecular Ecology 7: 601-608.
Caron H, Dumas S, Marque G, Messier C, Bandou E, Petit RJ, Kremer A (2000) Spatial and temporal distribution of chloroplast DNA polymorphism in a tropical tree species. Molecular Ecology 9: 1089-1098.
Cavers S, Navarro C, Hopkins P, Ennos R, Lowe AJ (In press) Regional and population-scale influences on genetic diversity partitioning within Costa Rican populations of the pioneer tree Vochysia ferruginea Mart. Silvae Genetica.
Cavers S, Degen B, Caron H, Hardy O, Lemes M, Gribel R, Margis R, Salgueiro F, Lowe AJ (2005) Optimal sampling strategy for estimation of spatial genetic structure in tree populations. Heredity 95: 281-289.
Cavers S, Navarro C, Lowe AJ (2004) Targeting genetic resource conservation in widespread species: a case study of Cedrela odorata L. Forest Ecology and Management 197: 285-294.
Cavers S, Navarro C, Lowe AJ (2003) A combination of molecular markers (cpDNA PCR-RFLP, AFLP) identifies evolutionarily significant units in Cedrela odorata L. (Meliaceae) in
Cavers S, Navarro C, Lowe AJ (2003) Chloroplast DNA phylogeography reveals colonisation history of a Neotropical tree, Cedrela odorata L., in
Chagné D, Chaumeil P, Ramboer A, Collada C, Guevara A, Cervera MT, Vendramin GG, Garcia V, Frigerio J-M, Echt C, Richardson T, Plomion C (2004) - Cross species transferability and mapping of genomic and cDNA SSRs in pines. Theoretical and Applied Genetics 109: 1204-1214.
Chase MR, Boshier DH, Bawa KS (1995) Population genetics of Cordia alliodora (Boraginaceae), a neotropical tree. 1. Genetic variation in natural populations. American Journal of Botany 82: 468-475.
Colpaert N, Cavers S, Bandou E, Caron H, Gheysen G, Lowe AJ (In press) Sampling tissue for DNA analysis of trees: trunk cambium as an alternative to canopy leaves, Silvae Genetica.
Cottrell J, Munro RC, Tabbener H, Gillies ACM, Deans D, Lowe AJ (2002) Distribution of Chloroplast DNA variation in British Oaks (Quercus robur and Q. petraea): the influence of postglacial colonisation and human management. Forest Ecology and Management (Special Issue) 156: 181-196.
Cottrell JE, Munro RC, Tabbener HE, Milner AD, Forrest GI & Lowe AJ (2003) Comparison of fine-scale genetic structure within two British oakwoods using microsatellites; consequences of recolonsiation dynamics and past management.
Davies S, White A, Lowe AJ (2004) An investigation into effects of long-distance seed dispersal on organelle population genetic structure and colonization rate: a model analysis. Heredity. 93: 566-576.
Degen B, Bandou E, Caron H (2004) Limited pollen dispersal and biparental inbreeding in Symphonia globulifera in
Degen B, Roubilk DW (2004) Effects of animal pollination on pollen dispersal, selfing, and effective population size of tropical trees: A simulation study. Biotropica 36: 165-179.
Degen B, Caron H, Bandou E, Maggia L, Chevallier MH, Leveau A, Kremer A (2001) Fine-scale spatial genetic structure of eight tropical tree species as analysed by RAPDs. Heredity 87: 497-507.
Degen B, Petit RJ, Kremer A (2001) SGS - Spatial genetic software: A computer program for analysis of spatial genetic and phenotypic structures of individuals and populations. Journal of Heredity 92: 447-449.
Degen B, Gregorius HR, Scholz F (1996) ECO-GENE, a model for simulation studies on the spatial and temporal dynamics of genetic structures of tree populations. Silvae Genetica 45: 323-329.
Dick CW, Wright SJ (2005) Tropical mountain cradles of dry forest diversity. Proceedings of the National Academy of Sciences of the USA 102 (31): 10757-10758.
Austerlitz F, Dick CW, Dutech C, Klein EK, Oddou-Muratorio S,
Dick CW, Etchelecu G, Austerlitz F (2003) Pollen dispersal of tropical trees (Dinizia excelsa: Fabaceae) by native insects and African honeybees in pristine and fragmented Amazonian rainforest. Molecular Ecology 12: 753-764.
Dick C (2001) Genetic Rescue of Remnant Tropical Trees by an Alien Pollinator. Proceedings of the Royal Society of
Dick C, Abdul-Salim C, Bermingham E (2003) Molecular Systematics Reveals Cryptic Tertiary Diversification of a Widespread Tropical Rainforest Tree. American Naturalist 162: 691- 703.
Dick CW,
Fady B, Lefèvre F , Reynaud M, Vendramin GG , Bou Dagher-Kharrat MM, Anzidei M, Pastorelli R, Savouré A, Bariteau M (2003) - Gene flow among different taxonomic units: evidence from nuclear and cytoplasmic markers in Cedrus plantation forests. Theoretical and Applied Genetics 107: 1132-1138.
Fineschi S, Anzidei M, Cafasso D, Cozzolino S, Garfì G, Pastorelli R, Salvini D, Turchini D, Vendramin GG (2002) – Molecular markers reveal a strong genetic differentiation between two European relic tree species: Zelkowa abelicea (Lam.) Boissier and Z. Sicula Di Pasquale, Garfì & Quezel (Ulmaceae). Conservation Genetics 3: 145-154.
Fineschi S, Carnevale S, Salvini D, Taurchini D, Vendramin GG (2003) - Chloroplast DNA variation of Tilia cordata Mill. Canadian Journal of
Fineschi S, Cozzolino S, Migliaccio M, Vendramin GG (2004) - Genetics and conservation of relic tree species: the case of Mediterranean Zelkova abelicea (Lam.) Boisser and Z. sicula Di Pasquale, Garfì & Quézel (Ulmaceae).
Fineschi S, Cozzolino S, Migliaccio M, Musacchio A, Innocenti M, Vendramin GG (2005) – Sicily represents the Italian reservoir of chloroplast DNA diversity of Quercus ilex (Fagaceae). Annals of
Fineschi S, Salvini D, Turchini D, Pastorelli R, Vendramin GG (2005) - Crataegus monogyna Jacq. and C. laevigata (Poir.) DC. (Rosaceae, Maloideae) display low level of genetic diversity assessed by chloroplast markers. Plant Systematic and Evolution 250: 187-196.
Fineschi S, Taurchini D, Grossoni P, Vendramin GG (2002) - Chloroplast DNA variation of white oaks in Italy.
Gerber S, Chabrier P, Kremer A (2003) FAMOZ: a software for parentage analysis using dominant, codominant and uniparentally inherited markers. Molecular Ecology Notes 3: 479-481.
Gerber S, Mariette S, Streiff R, Bodenes C, Kremer A (2000) Comparison of microsatellites and amplified fragment length polymorphism markers for parentage analysis. Molecular Ecology 9: 1037-1048.
Gillies ACM, Navarro C, Lowe AJ, Newton AC, Hernandez M, Wilson J, Cornelius JP (1999) Genetic diversity in Mesoamerican populations of mahogany (Swietenia macrophylla), assessed using RAPDs. Heredity 83: 722-732.
Gómez A, Vendramin GG, González-Martínez SC, Alía R (2005) - Genetic diversity and differentiation of two Mediterranean pines (P. halepensis Mill. and P. pinaster Ait.) along a latitudinal cline using chloroplast microsatellite markers. Diversity and Distributions 11: 257-263.
González-Martínez SC, Mariette S, Ribeiro MM, Burban C, Raffin A, Chambel MR, Ribeiro CAM, Aguiar A, Plomion C, Alía R, Gil L, Vendramin GG, Kremer A (2004) - Genetic resources in maritime pine (Pinus pinaster Aiton): molecular and quantitative measures of genetic variation and differentiation among maternal lineages.
Gould MS, Lowe AJ, Clarke GP (1993) The frequency of termite (Isoptera) damage to tree species in
Gribel R (2001) Biologia Reprodutiva de Plantas Amazas: Importia para o Uso, Manejo e Conserva dos Recursos Naturais. Humanidades (Tos em Biologia) 48.
Gribel R,
Gribel R, Gibbs P, Queiróz AL (1999) Flowering phenology and pollination biology of Ceiba pentandra (Bombacaceae) in Central Amazon. Journal of Tropical Ecology 15: 247-263.
Gribel R, Kirst M, Missiaggia AA, Grattapaglia D (1999). Estudo do sistema de cruzamento e do fluxo de pem Ceiba pentandra (Bombacaceae) atravdo uso de marcadores microsattes. Genetics and Molecular Biology 22 - supplement: 603.
Grivet D, Heinze B, Vendramin GG, Petit RJ (2001) - Genome walking with consensus primers: application to the Large Single Copy region of chloroplast DNA. Molecular Ecology Notes 1: 345-349.
Guevara MA, Chagné D, Almeida MH, Byrne M, Collada C, Favre JM, Harvengt L, Jeandroz S, Orazio C, Plomion C, Ramboer A, Rocheta M, Sebastiani F, Soto A, Vendramin GG, Cervera MT (2005) - Isolation and characterization of nuclear microsatellite loci in P. pinaster Ait. Molecular Ecology Notes 5: 57-59.
Gugerli F, Senn J, Anzidei M, Madaghiele A, Buchler U, Sperisen C, Vendramin GG (2001) - Chloroplast microsatellites and mitochondrial nad1 intron 2 sequences indicate congruent phylogenetic relationships of Swiss stone pine (Pinus cembra), Siberian stone pine (P. sibirica) and Siberian dwarf pine (P. pumila). Molecular Ecology 10: 1489-1497.
Hannan-Jones MA, Lowe AJ, Scott KD, Graham GC, Playford JP, Zalucki MP (2005) Isolation and characterisation of microsatellite loci from mother-of-millions, Bryophyllum delagoense (Crassulaceae), and its hybrid with B. daigremontianum “Houghton’s hybrid”.
Hansen OK, Kjær ED, Vendramin GG (2005) - Chloroplast microsatellite variation in Abies nordmanniana and simulation of causes for low differentiation among populations. Tree Genetics and Genomes (in press)
Hansen OK, Vendramin GG, Sebastiani F, Edwards KJ (2005) - Development of microsatellite markers in Abies nordmanniana (Stev.) Spach and cross-species amplification in the Abies genus. Molecular Ecology Notes (in press).
Hardesty BD, Dick CW, Kremer A, Hubbell S, Bermingham E (2005)
Spatial genetic structure of Simarouba amara Aubl. (Simaroubaceae), a dioecious, animal-dispersed Neotropical tree, on
Heuertz M, Fineschi S, Anzidei M, Pastorelli R, Salvini D, Paule L, Frascaria-Lacoste N, Hardy OJ, Vekemans X, Vendramin GG (2004) - Chloroplast DNA variation and postglacial recolonisation of common ash (Fraxinus excelsior L.) in Europe. Molecular Ecology 13: 3437-3452.
Heuertz M, Hausman J-F, Hardy OJ, Vendramin GG, Frascaria-Lacoste N, Vekeman X (2004) - Nuclear microsatellites reveal contrasting pattern of genetic structure between western and southeastern European populations of the common ash (Fraxinus excelsior L.). Evolution 58: 976-988.
Jennings SB,
Jensen JS, Gillies ACM, Csaikl U, Munro RC, Madsen SF, Roulund H, Lowe AJ (2002) Chloroplast DNA variation within the Nordic countries. Forest Ecology and Management (Special Issue) 156: 167-180.
Jensen JS,
Kremer A, Caron H, Cavers S, Colpaert N, Gheysen L, Gribel R, Lemes M, Lowe A, Margis R, Navarro C, Salgueiro F (2005) Monitoring genetic diversity in tropical trees with multilocus dominant markers. Heredity 95: 274-280.
Kremer A, Dupouey JL, Deans JD, Cottrell J, Csaikl U, Finkeldey R, Espinel S, Jensen J, Kleinschmit J, Dam BV, Ducousso A, Forrest I, Heredia ULd, Lowe AJ, Tutkova M, Munro RC, Steinhoff S, Badeau V (2002) Morphological variation in mixed oak stands (Quercus robur and Quercus petraea) is stable across western European populations. Annals of
Kremer A, Kleinschmit J, Koenig A, Cundall N, Deans JD, Lowe AJ, Munro RC, Petit RJ, Stephan R (2002) Is there a correlation between chloroplastic divergence and phenotypic or nuclear genetic divergence in European oaks? Forest Ecology and Management (Special Issue) 156: 75-88.
Latouche-Halle C, Ramboer A, Bandou E, Caron H, Kremer A (2004) Long-distance pollen flow and tolerance to selfing in a neotropical tree species. Molecular Ecology 13: 1055-1064.
Latouche-Hallé C, Ramboer A, Bandou E, Caron H, Kremer A (2003) Nuclear and chloroplast genetic structure indicate fine-scale spatial dynamics in a neotropical tree population. Heredity 91:181-190.
Latouche-Halle C, Ramboer A, Bandou E, Caron H, Decroocq S (2002) Isolation and characterization of microsatellite markers in the tropical tree species Dicorynia guianensis (Caesalpinaceae). Molecular Ecology Notes 2: 228-230.
Laurance WF, Oliveira AA, Laurance SG, Condit R, Dick CW, Andrade A, Nascimento HEM, Lovejoy TE, Ribeiro JELS (2005) Altered tree communities in undisturbed Amazonian forests: A consequence of global change? Biotropica 37: 160-162.
Laurance WF, Oliveira AA, Laurance SG, Condit R, Nascimento HEM, Sanchez-Thorin AC, Lovejoy TE, Andrade A, D'Angelo S, Ribeiro JE, Dick CW (2004) Pervasive alteration of tree communities in undisturbed Amazonian forests. Nature 428 (6979): 171-175.
Leigh EG, Davidar P, Dick CW, Puyravaud JP, Terborgh J, ter Steege H, Wright SJ (2004) Why do some tropical forests have so many species of trees? Biotropica 36: 447-473.
Lemes MR, Grattapaglia D, Gribel R (2000) Mating system of mahogany (Swietenia macrophylla King: Meliaceae) in the Brazilian Amazon assessed by microsatellite markers: Implications for conservation. Genetics and Molecular Biology 23(supplement): 472.
Lemes MR, Brondani RPV, Grattapaglia D (2002) Multiplexed systems of microsatellite markers for genetic analysis in mahogany, Swietenia macrophylla King (Meliaceae), a threatened Neotropical timber species. Journal of Heredity 93: 287-291.
Lemes MR, Gribel R, Proctor J, Grattapaglia D (2003) Population genetic structure of mahogany (Swietenia macrophylla King, Meliaceae) across the Brazilian Amazon, based on variation at microsatellite loci: implications for conservation. Molecular Ecology 12: 2875-2883.
Liepelt S, Kuhlenkamp V, Anzidei M, Vendramin GG, Ziegenhagen B (2001) - Pitfalls in determining size homoplasy of microsatellite loci. Molecular Ecology Notes 1: 323-325.
Lowe A (2005) Population genetics of neotropical trees focus issue. Heredity 95: 243-245.
Lowe AJ, Abbott RJ (1996) Origins of the new allopolyploid species Senecio cambrensis (Asteraceae) and its relationship to the
Lowe AJ, Abbott RJ (2000) Routes of origin of two recently evolved hybrid taxa: Senecio vulgaris var. hibernicus and
Lowe AJ, Abbott RJ (2003) A new British species, Senecio eboracensis (Asteraceae), another hybrid derivative of S. vulgaris L. and S. squalidus L. Watsonia 24: 375-388.
Lowe AJ, Abbott RJ (2004) Reproductive isolation of a new hybrid species, Senecio eboracensis. Heredity 92: 386-395.
Lowe AJ, Bandou E, Breyne P, Caron H, Cavers S, Colpaert N, Degen B, Gribel R, Hernandez M, Kremer A, Labbe P, Lemes M, Margis R, Margis‑Pinheiro M, van Montagu M, Navarro C, Wilson J (2001) Assessment of Levels and Dynamics of Intra-Specific Genetic Diversity of Latin American Tropical Trees for Conservation and Sustainable Management.
Lowe AJ, Boshier D, Ward M, Bacles CFE, Navarro C (2005) Genetic resource impacts of habitat loss and degradation; reconciling empirical evidence and predicted theory for neotropical trees. Heredity 95: 255-273.
Lowe AJ, Jones AE, Raybould AF, Trick M, Moule CJ, Edwards K (2002) Transferability and genome specificity of a new set of microsatellite primers among Brassica species of the U triangle.
Lowe AJ, Jourde B, Breyne P, Colpaert N, Navarro C, Wilson J, Cavers S (2003) Fine scale genetic structure and gene flow within Costa Rican populations of mahogany (Swietenia macrophylla). Heredity 90: 268-275.
Lowe AJ, Goodall-Copestake W, Caron H, Kremer A, Decroocq S (2002) A set of polymorphic microsatellites for Vochysia ferruginea, a Neo tropical tree. Molecular Ecology Notes 2: 153-155.
Lowe AJ, Hanotte O, Guarino L (1996) Standardisation of molecular genetic techniques for the characterisation of germplasm collections: The case for random amplified polymorphic DNA (RAPD). Plant Genetic Resources Newsletter 107: 50-54.
Lowe AJ, Hanson J, Teale A (1996) Molecular characterisation of Napier grass (Pennisetum purpureum) using random amplified polymorphic DNA (RAPD) markers. African Feed Resources Network Newsletter 6: 4-8.
Lowe AJ, Hicks BJ, Worley K, Ennos RA, Morman JD, Stone G, Watt AD (accepted, May 2005) Dispersal, colonisation and host range expansion within Scottish populations of the pine beauty moth, Panolis flammea. Bulletin of Entomological Research.
Lowe AJ, Moule C, Trick M, Edwards KJ (2004) Efficient large-scale development of microsatellites for marker and mapping applications in Brassica crop species. Theoretical and Applied Genetics 108: 1103-1112.
Lowe AJ, Munro RC, Samuel S, Cottrell J (2004) The utility and drawbacks of chloroplast DNA for identifying native British oak stands. Forestry 77: 335-347.
Lowe AJ, Russell JR, Powell W, Dawson IK (1998) Identification and characterization of nuclear, cleaved amplified polymorphic sequences (CAPS) loci in Irvingia gabonensis and
Lowe AJ, Sturrock GL (1998) Behaviour and diet of Colobus angolensis palliatus
Lowe AJ, Thorpe W, Teale A & Hanson J (2003) Characterisation of germplasm accessions of Napier grass (Pennisetum purpureum and P. purpureum x P. glaucum hybrids) and comparison with farm clones using RAPD. Genetic Resources and Crop Evolution 50: 121-132.
Lowe AJ, Wilson J, Gillies ACM,
Margis R, Félix DB, Caldas JF, Salgueiro F, de Araujo DSD, Breyne P, van Montagu M, de Oliveira DE and Margis-Pinheiro M (2002) Genetic differentiation among three neighbouring Brazil-cherry (Eugenia uniflora L.) populations within the Brazilian Atlantic rain forest. Biodiversity and Conservation 11: 149-163
Mariette S, Cottrell J, Csaikl UM, Goikoechea P, König A, Lowe AJ, Van Dam BC, Barreneche T, Bodénès C, Streiff R, Burg K, Groppe K, Munro RC, Tabbener H, Kremer A (2002) Comparison of levels of genetic diversity detected with AFLP and microsatellite markers within and among mixed Q. petraea (Matt.) Liebl. and Q. robur L. stands. Silvae Genetica 51: 72-79.
Menozzi P, Lowe AJ (2003) Spatial dynamics and natural regeneration: Dynamics and conservation of genetic diversity in forest ecosystems.
Muir C, Lowe AJ, Fleming CC, Vogl C (2004) High nuclear genetic diversity, high levels of outcrossing and low differentiation among remnant populations of Quercus petraea at the margin of its range in Ireland. Annals of Botany 93: 691-697.
Muschner V, Lorenz AP, Cervi P, Armando C, Bonatto SL, Souza-Chies TT0, Freitas LB (2003) A first molecular phylogenetic anaysis in Passiflora (Passifloraceae). American Journal of Botany 90: 1229-1238.
Navarro C, Cavers S, Breyne P, Colpaert N, Lowe AJ (In press) Chloroplast and total genomic diversity in the endemic Costa Rican tree Lonchocarpus costaricensis (J.D.Smith) Pittier (Papilionaceae). Silvae Genetica.
Navarro C, Cavers S, Pappinen A, Tigerstedt P, Lowe A, Merilä J (In press) Comparing and contrasting quantitative traits and neutral genetic markers for genetic resource assessment of Mesoamerican Cedrela odorata. Silvae Genetica.
Navarro C, Ward S, Hernandez M (2002) The tree Cedrela odorata (Meliaceae): a morphologically subdivided species in
Newton AC, Allnutt T, Gillies ACM, Lowe AJ, Ennos RA (1999) Molecular phylogeography, intraspecific variation and the conservation of tree species. Trends in Ecology and Evolution. 14: 140-145.
Novick RR, Dick C, Lemes MR, Navarro C, Caccone A, Bermingham E (2003) Genetic structure of Mesoamerican populations of big-leaf mahogany (Swietenia macrophylla) inferred from microsatellite analysis. Molecular Ecology 12: 2885-2893.
Parducci L, Szmidt AE, Madaghiele A, Anzidei M, Vendramin GG (2001) – Family structure in Abies nebrodensis (Lojac.) Mattei and differentiation from related Abies species using allozymes and chloroplast microsatellites. Theoretical and Applied Genetics 102: 733-740.
Palme A, Vendramin GG (2002) - Chloroplast DNA variation, postglacial recolonisation and hybridisation in hazel, Corylus avellana. Molecular Ecology 9: 1769-1780.
Parolin P (2001) Morphological and physiological adjustments to waterlogging and drought in seedlings of Amazonian floodplain trees. Oecologia 128: 326-335.
Parolin P (2002) Submergence tolerance vs. escape from submergence: two strategies of seedling establishment in Amazonian floodplains. Environm. Experim. Botany 48(2): 177-186.
Pastorelli R, Smulders MJM, van't Westende WPC, Vosman B, Giannini R, Vettori C, Vendramin GG (2003) – Characterisation of microsatellite markers in Fagus sylvatica L. and Fagus orientalis Lipsky. Molecular Ecology Notes 3: 76-78.
Pennington RT, Dick CW (2004) The role of immigrants in the assembly of the South American rainforest tree flora. Philosophical Transactions of the Royal Society of London Series B – Biological Sciences 359 (1450): 1611-1622.
Peres CA, Baider C, Zuidema PA, Wadt LHO, Kainer KA, Gomes-Silva DAP, Salomao RP, Simoes LL, Franciosi ERN, Valverde FC, Gribel R, Shepard GH, Kanashiro M, Coventry P, Yu DW, Watkinson AR, Freckleton RP (2003) Demographic threats to the sustainability of Brazil nut exploitation. Science 302(5653): 2113-2114.
Petit R, Aguinagalde I, de Beaulieu JL, Bittkau C, Brewer S, Chedaddi R, Ennos R, Fineschi S, Grivet D, Lascoux M, Mohanty A, Muller-Starck G, Demesure-Musch B, Palme A, Martin JP, Rendell S, Vendramin GG (2003) – Glacial refugia: hotspot but not melting pots of genetic diversity. Science 300: 1563-1565.
Petit RJ, Brewer S, Bordacs S, Burg K, Cheddadi R, Coart E, Cottrell J, Csaikl U, Fineschi S, Goicoechea P, Jensen JS, König A, Lowe AJ, Madsen SF, Matyas G, Oledska I, Popescu F, Slade D, Van Dam B, de Beaulieu J-L, Kremer A (2002) Identification of refugia and post-glacial colonisation routes of European white oaks based on chloroplast DNA and fossil pollen evidence. Forest Ecology and Management (Special Issue) 156: 49-74.
Petit RJ, Csaikl U, Bordacs S, Burg K, Coart E, Cottrell J, van Dam B, Deans JD, Glaz I, Dumolin-Lapègue S, Fineschi S, Finkelday R, Gillies ACM, Goicoechea PG, Jensen JS, König A, Lowe AJ, Madsen SF, Matyas G, Munro RC, Olalde M, Pemonge M-H, Popescu F, Slade D, Tabbener H, Taurchini D, de Vries SGM, Ziegenhagen B, Kremer A (2002) Chloroplast DNA variation in European white oaks: Phylogeography and patterns of diversity based on data from over 2,600 populations. Forest Ecology and Management (Special Issue) 156: 5-26.
Petit RJ, Duminil J, Fineschi S, Hampe A, Salvini D, Vendramin GG (2005) - Comparative organisation of chloroplast, mitochondrial and nuclear diversity in plant populations. Molecular Ecology 14: 689-701.
Petit RJ, Deguilloux M-F, Chat J, Grivet D, Garnier-Géré P, Vendramin GG (2005) - Removing the bias due to different numbers of repeats when comparing measures of diversity at microsatellite loci. Molecular Ecology 14: 885-890.
Phillips PD, Thompson IS, Silva JNM, van Gardingen PR, Degen B (2004) Scaling up models of tree competition for tropical forest population genetics simulation. Ecological Modelling 180: 419-434.
Phillips PD, de Azevedo CP, Degen B, Thompson IS, Silva JNM, van Gardingen PR (2004) An individual-based spatially explicit simulation model for strategic forest management planning in the eastern Amazon. Ecological Modelling 173: 335-354.
Plomion C, LePrevost G, Pot D, Vendramin GG, Gerber S, Decroocq S, Brach J, Raffin A, Pastuszka P (2001) - Estimation of pollen contamination in a maritime pine polycross seed orchard and certification of improved seeds using cpSSR. Canadian Journal of
Porth I, Scotti-Saintagne C, Barreneche T, Kremer A, Burg K (2005) Linkage Mapping of Osmotic Stress Induced Genes of Oak. Tree Genetics and Genomes 1: 31-40.
Riberio MM, LePrevost G, Gerber S, Vendramin GG, Anzidei M, Decroocq S, Marpeau A, Mariette S, Plomion C (2002) – Origin identification of maritime pine stands in
Ribeiro MM, Mariette S, Vendramin GG, Szmidt AE, Plomion C, Kremer A (2002) - Comparison of genetic diversity estimates within and among populations of maritime pine using cpSSR and AFLP data. Molecular Ecology 11: 869-877.
Roth RS, Dick C, Lemes M, Navarro C, Caccone A, Bermingham E (2003) Genetic structure of Mesoamerican populations of big-leaf mahogany (Swietenia macrophylla) inferred by microsatellite analysis. Molecular Ecology 12: 2885-2893.
Rubini A, Paolocci F, Riccioni C, Vendramin GG, Arcioni S (2005) - Genetic and Phylogeographic Structure in the Symbiotic Fungus Tuber magnatum. Applied and Environmental Microbiology (in press)
Saintagne C, Bodénès C, Barreneche T, Pot D, Plomion C, Kremer A (2004) Distribution of genomic regions differentiating oak species assessed by QTL detection. Heredity 92: 20-30.
Salgueiro F, Caron H, De Souza MIF, Kremer A, Margis R (2005) Characterization of nuclear microsatellite loci in South American Araucariaceae species. Molecular Ecology Notes 5: 256-258.
Salgueiro F, Felix D, Caldas JF, Margis-Pinheiro M, Margis R (2004) Even population differentiation for maternal and biparental gene markers in Eugenia uniflora, a widely distributed species from the Brazilian coastal Atlantic rain forest. Diversity and Distributions 10: 201-210.
Salvini D, Anzidei M, Fineschi S, Malvolti ME, Taurchini D, Vendramin GG (2001) - Low genetic differentiation among Italian populations of Populus tremula L. estimated using chloroplast PCR-RFLP and microsatellite markers.
Santini A, Montaghi A, Vendramin GG, Capretti P (2005) – Analysis of the Italian dutch elm disease fungal population. Journal of Phytopathology 153: 73-79.
Scalfi M, Troggio M, Piovani P, Leonardi S, Magnaschi G, Vendramin GG, Menozzi P (2004) - A first RAPD, AFLP and SSR linkage map and QTL analysis in European beech (Fagus sylvatica L.). Theoretical and Applied Genetics 108: 433-441.
Scott KD, Wilkinson KS, Lawrence N, Lange CL, Scott LJ, Merritt MA, Lowe AJ, Graham GC (accepted, Dec 2004) Gene-flow between populations of the economic pest Cotton bollworm Helicoverpa armigera Hübner (Lepidoptera: Noctuidae) are highly variable between years: Records from across Australia’s major cotton and grain growing regions from November 1999 – March 2003. Bulletin of Entomological Research 94: 381-392.
Scotti-Saintagne C, Bodénès C, Barreneche T, Bertocchi E, Plomion C, Kremer A (2004) Detection of quantitative trait loci controlling bud burst and height growth in Quercus robur L. Theoretical and Applied Genetics 109: 1648:1659.
Scotti-Saintagne C, Costa P, Bertocchi E, Barreneche T, Kremer A, Plomion C (2005) Quantitative trait loci mapping for vegetative propagation in pedunculate oak. Annals of
Scotti-Saintagne C, Mariette S, Porth I, Goicoechea PG, Barreneche T, Bodénès C, Burg K, Kremer A (2004) Genome scanning for interspecific differentiation between two closely related oak species (Quercus robur L. and Q. petraea (Matt.) Liebl.). Genetics. 168: 1615-1626.
Sebastiani F, Buonamici A, Fineschi S, Racchi ML, Raddi P, Vendramin GG (2005) – Novel polymorphic microsatellites in Cupressus sempervirens. Molecular Ecology Notes 5: 393-394.
Sebastiani F, Carnevale S, Vendramin GG (2004) - A new set of mono- and di-nucleotide chloroplast microsatellites in Fagaceae. Molecular Ecology Notes 4: 259-261.
Semêdo LTAS, Gomes RC, Linhares AA, Duarte GF, Nascimento RP,
Semerikov VL, Vendramin GG, Sebastiani F, Lascoux M (2005) - RAPD-derived, PCR-based mitochondrial markers for Larix species and their usefulness in phylogeny. Conservation Genetics (in press).
Sperisen C, Buchler U, Gugerli F, Matyas G, Geburek T, Vendramin GG (2001) - Tandem repeats in plant mitochondrial genomes: a novel molecular marker type for population genetic studies. Molecular Ecology 10: 257-263.
Squirrell J, Hollingsworth PM, Woodhead M, Russell J, Lowe AJ, Gibby M, Powell W (2003) How much effort is required to isolate nuclear microsatellites from plants?
Storme V, Vanden Broeck A, Ivens B, Halfmaerten D, Van Slycken J, Castiglione S, Grassi F, Fossati T, Cottrell JE, Tabbener HE, Lefèvre F, Saintagne C, Fluch S, Krystufek V, Burg K, Bordács S, Borovics A, Gebhardt K, Vornam B, Pohl A, Alba N, Agúndez D, Maestro C, Notivol E, Bovenschen J, van Dam BC, van der Schoot J, Vosman B, Boerjan W, Smulders MJM (2004) Ex‑situ conservation of Black poplar in Europe: genetic diversity in nine gene bank collections and their value for nature development. Theoretical and Applied Genetics 108(6): 969-981.
Taylor KJ, Lowe AJ, Hunter RJ, Ridgway T, Gresshoff PM, Rossetto M (accepted, March 2005) Genetic diversity and regional identity in the Australian remnant Nothofagus moorei. Australian Journal of Botany 53: 437-444.
Ward M, Dick CW, Gribel R, Lowe AJ (2005) To self, or not to self... A review of outcrossing and pollen-mediated gene flow in neotropical trees. Heredity 95: 246-254.
White GM, Boshier DH, Powell W (2002) Increased pollen flow counteracts fragmentation in a tropical dry forest : an example from Swietenia humilis Zuccarini. Proceedings of the
White GM, Boshier DH, Powell W (1999) Genetic variation within a fragmented population of Swietenia humilis Zucc. Molecular Ecology 8: 1899-1909.
Schroth G, da Fonseca GAB, Harvey CA, Gascon C, Vasconcelos HL, Izac AMN, Angelsen A, Finegan B, Kaimowitz D, Krauss U, Laurance SG, Laurance WF, Nasi R, Naughton-Treves L, Niesten E, Richardson DM, Somarriba E, Tucker NIJ, Vincent G, Wilkie DS. In press. Agroforestry and Biodiversity Conservation in Tropical Landscapes - a Synthesis. In G. Schroth, H.
Duivrenvoorden J, Balslev H, Cavalier J, Grandez C, Tuomisto H, Valencia R (2001) Evaluación de recursos vegetales no maderables en la Amazonía noroccidental. IBED. University of Amsterdam. Amsterdam.
Valencia R, Pitman N, León-Yánez S, Jørgensen PM (2000) Libro rojo de las plantas endémicas del Ecuador. Herbario QCA, Pontificia Universidad Católica del Ecuador, Quito.
Vettori C, Vendramin GG, Anzidei M, Pastorelli R, Paffetti D, Giannini R (2004) - Geographic distribution of chloroplast variation in Italian populations of beech (Fagus sylvatica L.). Theoretical and Applied Genetics 109: 1-9.
White GM, Boshier DH (2000). Fragmentation in Central American dry forests - genetic impacts on Swietenia humilis. In: Genetics, demography and the viability of fragmented populations. Young, A. G., Clarke, G. (Eds.) Cambridge University Press, Cambridge, UK. pp. 293-311.